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  5. Tin_g12832

Tin_g12832


Description : histone H3 methylation reader (PWO) of PRC2 histone methylation complex & original description: none


Gene families : OG0002361 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002361_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12832

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00215850 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.06 OrthoFinder output from all 47 species
Ceric.06G066400.1 Ceric.06G066400 histone H3 methylation reader (PWO) of PRC2 histone... 0.03 OrthoFinder output from all 47 species
GSVIVT01024445001 No alias Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Len_g22550 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.02 OrthoFinder output from all 47 species
Sam_g10571 No alias histone H3 methylation reader (PWO) of PRC2 histone... 0.02 OrthoFinder output from all 47 species
Zm00001e015543_P002 Zm00001e015543 histone H3 methylation reader (PWO) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 28 103
No external refs found!