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  5. Tin_g12648

Tin_g12648 (SAMT1, SAMC1)


Aliases : SAMT1, SAMC1

Description : solute transporter *(MTCC) & original description: none


Gene families : OG0003529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003529_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g12648

Target Alias Description ECC score Gene Family Method Actions
Cre06.g286250 SAMT1, SAMC1 Solute transport.carrier-mediated transport.MC-type... 0.02 OrthoFinder output from all 47 species
Ehy_g00868 SAMT1, SAMC1 solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001423001 SAMT1, SAMC1 Solute transport.carrier-mediated transport.MC-type... 0.02 OrthoFinder output from all 47 species
GSVIVT01022254001 SAMT1, SAMC1 Solute transport.carrier-mediated transport.MC-type... 0.02 OrthoFinder output from all 47 species
LOC_Os05g29860.2 SAMT1, SAMC1,... solute transporter (MTCC) 0.04 OrthoFinder output from all 47 species
Mp8g05870.1 SAMT1, SAMC1 solute transporter (MTCC) 0.03 OrthoFinder output from all 47 species
Sam_g14467 No alias solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g051580.4.1 SAMT1, SAMC1,... solute transporter (MTCC) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070403 NAD+ binding IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0140673 transcription elongation-coupled chromatin remodeling IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 42 113
IPR018108 Mitochondrial_sb/sol_carrier 216 300
IPR018108 Mitochondrial_sb/sol_carrier 120 203
No external refs found!