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  5. Tin_g08624

Tin_g08624 (LHT1)


Aliases : LHT1

Description : amino acid transporter *(LHT) & original description: none


Gene families : OG0000789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000789_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g08624

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00198670 LHT1,... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Adi_g016074 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04359 LHT1 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06747 No alias amino acid transporter *(LHT) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23226 LHT2, AATL2, ATLHT2 amino acid transporter *(LHT) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22054 LHT1 amino acid transporter *(LHT) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30187 LHT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05468 LHT1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15300 LHT1 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16448 LHT1 amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31675 LHT1 amino acid transporter *(LHT) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12864 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g18273 LHT1 amino acid transporter *(LHT) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22419 LHT2, AATL2, ATLHT2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g26545 LHT1 amino acid transporter *(LHT) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51524 LHT1 amino acid transporter *(LHT) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01008696001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Gb_14022 LHT2, AATL2, ATLHT2 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Gb_22126 LHT1 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
LOC_Os12g14100.1 LHT2, AATL2,... amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
MA_126371g0010 LHT1 amino acid transporter (LHT) 0.04 OrthoFinder output from all 47 species
Mp2g21590.1 No alias amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Mp6g02000.1 LHT2, AATL2, ATLHT2 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Smo270979 LHT1 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Solyc04g011590.3.1 LHT1, Solyc04g011590 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Solyc05g014530.1.1 LHT2, AATL2,... amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Zm00001e007895_P002 Zm00001e007895 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Zm00001e029254_P003 LHT1, Zm00001e029254 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species
Zm00001e029257_P002 LHT1, Zm00001e029257 amino acid transporter (LHT) 0.02 OrthoFinder output from all 47 species
Zm00001e029258_P001 LHT1, Zm00001e029258 amino acid transporter (LHT) 0.04 OrthoFinder output from all 47 species
Zm00001e029259_P001 LHT1, Zm00001e029259 amino acid transporter (LHT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 47 441
No external refs found!