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  5. Tin_g08501

Tin_g08501


Description : not classified & original description: none


Gene families : OG0000765 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000765_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g08501
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Adi_g003821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0038.g026330 No alias not classified & original description: CDS=24-1157 0.05 OrthoFinder output from all 47 species
Cba_g13572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G087700.1 Ceric.02G087700 not classified & original description: pacid=50584452... 0.06 OrthoFinder output from all 47 species
Ceric.14G018200.1 Ceric.14G018200 not classified & original description: pacid=50634515... 0.03 OrthoFinder output from all 47 species
Ceric.25G052900.1 Ceric.25G052900 not classified & original description: pacid=50593857... 0.03 OrthoFinder output from all 47 species
Ceric.31G033800.1 Ceric.31G033800 not classified & original description: pacid=50573729... 0.03 OrthoFinder output from all 47 species
Dac_g00772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g11978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g16705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36284 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g06404 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g10797 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11828 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000161 No alias not classified & original description: CDS=159-1424 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000665 No alias not classified & original description: CDS=1-1275 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010096 No alias not classified & original description: CDS=1-1284 0.02 OrthoFinder output from all 47 species
Sam_g09744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g17133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04300 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g10066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22239 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g37556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53605 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0004055 argininosuccinate synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR023210 NADP_OxRdtase_dom 116 431
No external refs found!