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  5. Tin_g08422

Tin_g08422


Description : susceptibility factor *(EXA1) & original description: none


Gene families : OG0000708 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000708_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g08422

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00074580 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G24300 No alias GYF domain-containing protein 0.03 OrthoFinder output from all 47 species
AT1G27430 No alias GYF domain-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g055823 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37682 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22450 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013373 No alias susceptibility factor *(EXA1) & original description: CDS=1-3141 0.03 OrthoFinder output from all 47 species
Azfi_s0052.g031617 No alias not classified & original description: CDS=1-4227 0.05 OrthoFinder output from all 47 species
Ceric.18G048100.1 Ceric.18G048100 susceptibility factor *(EXA1) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.33G057600.1 Ceric.33G057600 susceptibility factor *(EXA1) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g04272 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05076 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15753 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000922001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01009695001 No alias No description available 0.05 OrthoFinder output from all 47 species
Len_g14158 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04295 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07445 No alias susceptibility factor *(EXA1) & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g16227 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10117g0030 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10117g0040 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g13051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16118 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g23458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19486 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g41964 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12210 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20173 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g54992 No alias susceptibility factor *(EXA1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014813 No alias susceptibility factor *(EXA1) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g11581 No alias susceptibility factor *(EXA1) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24517 No alias susceptibility factor *(EXA1) & original description: none 0.02 OrthoFinder output from all 47 species
Smo438614 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc04g080240.4.1 Solyc04g080240 susceptibility factor (EXA1) 0.02 OrthoFinder output from all 47 species
Spa_g14135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003169 GYF 585 628
No external refs found!