Tin_g05984 (ATRAB8D, ATRABE1B, RABE1b)

Aliases : ATRAB8D, ATRABE1B, RABE1b

Description : translation elongation factor *(EF-Tu) & original description: none

Gene families : OG0001305 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001305_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g05984
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00049p00227880	ATRAB8D,...	Protein biosynthesis.organelle translation...	0.06	OrthoFinder output from all 47 species
AT4G20360	ATRAB8D, ATRABE1B, RABE1b	RAB GTPase homolog E1B	0.1	OrthoFinder output from all 47 species
Adi_g075285	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.11	OrthoFinder output from all 47 species
Aev_g21041	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.12	OrthoFinder output from all 47 species
Aev_g27656	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.03	OrthoFinder output from all 47 species
Ala_g04793	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.11	OrthoFinder output from all 47 species
Ala_g13913	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.03	OrthoFinder output from all 47 species
Als_g08146	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.04	OrthoFinder output from all 47 species
Als_g08147	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.04	OrthoFinder output from all 47 species
Als_g09356	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.12	OrthoFinder output from all 47 species
Als_g23756	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.11	OrthoFinder output from all 47 species
Als_g62452	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.08	OrthoFinder output from all 47 species
Aob_g15070	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.08	OrthoFinder output from all 47 species
Aop_g10494	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.1	OrthoFinder output from all 47 species
Aop_g25435	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene10728.t1	ATRAB8D,...	translation elongation factor *(EF-Tu) & original...	0.05	OrthoFinder output from all 47 species
Azfi_s0292.g063375	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.04	OrthoFinder output from all 47 species
Cba_g06908	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.07	OrthoFinder output from all 47 species
Cba_g22191	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.1	OrthoFinder output from all 47 species
Cba_g70878	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.13	OrthoFinder output from all 47 species
Ceric.10G078000.1	ATRAB8D,...	translation elongation factor *(EF-Tu) & original...	0.12	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021127.40	No alias	Protein biosynthesis.organelle translation...	0.01	OrthoFinder output from all 47 species
Cre06.g259150	No alias	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Dac_g02773	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.1	OrthoFinder output from all 47 species
Dcu_g08765	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.05	OrthoFinder output from all 47 species
Dde_g18792	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.05	OrthoFinder output from all 47 species
Ehy_g09796	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.09	OrthoFinder output from all 47 species
GSVIVT01007638001	ATRAB8D, ATRABE1B, RABE1b	Protein biosynthesis.organelle translation...	0.17	OrthoFinder output from all 47 species
Gb_29040	ATRAB8D, ATRABE1B, RABE1b	EF-Tu translation elongation factor	0.09	OrthoFinder output from all 47 species
LOC_Os02g38210.1	ATRAB8D,...	EF-Tu translation elongation factor	0.07	OrthoFinder output from all 47 species
Len_g22333	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.12	OrthoFinder output from all 47 species
Len_g22334	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.04	OrthoFinder output from all 47 species
Len_g39684	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.05	OrthoFinder output from all 47 species
Lfl_g06070	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.1	OrthoFinder output from all 47 species
MA_942991g0010	ATRAB8D, ATRABE1B, RABE1b	EF-Tu translation elongation factor	0.07	OrthoFinder output from all 47 species
Mp1g03870.1	ATRAB8D, ATRABE1B, RABE1b	EF-Tu translation elongation factor	0.05	OrthoFinder output from all 47 species
Msp_g11454	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.17	OrthoFinder output from all 47 species
Nbi_g13791	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.05	OrthoFinder output from all 47 species
Nbi_g14071	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.04	OrthoFinder output from all 47 species
Pir_g05476	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.04	OrthoFinder output from all 47 species
Pnu_g24392	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.04	OrthoFinder output from all 47 species
Pnu_g24394	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.04	OrthoFinder output from all 47 species
Ppi_g42943	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015523	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.04	OrthoFinder output from all 47 species
Sam_g07638	No alias	translation elongation factor *(EF-Tu) & original...	0.11	OrthoFinder output from all 47 species
Smo233481	ATRAB8D, ATRABE1B, RABE1b	Protein biosynthesis.organelle translation...	0.1	OrthoFinder output from all 47 species
Solyc03g112150.1.1	ATRAB8D,...	EF-Tu translation elongation factor	0.06	OrthoFinder output from all 47 species
Solyc06g071790.3.1	ATRAB8D,...	EF-Tu translation elongation factor	0.05	OrthoFinder output from all 47 species
Spa_g10864	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.15	OrthoFinder output from all 47 species
Spa_g10866	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.04	OrthoFinder output from all 47 species
Spa_g18775	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.03	OrthoFinder output from all 47 species
Spa_g50677	ATRAB8D, ATRABE1B, RABE1b	translation elongation factor *(EF-Tu) & original...	0.05	OrthoFinder output from all 47 species
Zm00001e015008_P001	ATRAB8D,...	EF-Tu translation elongation factor	0.06	OrthoFinder output from all 47 species
Zm00001e022880_P001	ATRAB8D,...	EF-Tu translation elongation factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	HCCA
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004160	Transl_elong_EFTu/EF1A_C	374	473
IPR004161	EFTu-like_2	301	369
IPR000795	T_Tr_GTP-bd_dom	76	277

External Links

No external refs found!

Tin_g05984 (ATRAB8D, ATRABE1B, RABE1b)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation