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  5. Tin_g05587

Tin_g05587


Description : not classified & original description: none


Gene families : OG0002218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002218_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g05587
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Adi_g020982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023697 No alias not classified & original description: CDS=103-1617 0.03 OrthoFinder output from all 47 species
Cba_g06408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015328001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os05g48416.1 LOC_Os05g48416 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g17948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0127.g021835 No alias not classified & original description: CDS=155-1633 0.04 OrthoFinder output from all 47 species
Zm00001e020830_P002 Zm00001e020830 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!