Tin_g04518

Description : E3 ubiquiTin ligase *(SINA) & original description: none

Gene families : OG0000462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000462_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g04518

Target	Alias	Description	ECC score	Gene Family Method
Als_g12148	No alias	E3 ubiquitin ligase *(SINA) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g29925	No alias	E3 ubiquitin ligase *(SINA) & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0069.g036509	No alias	E3 ubiquitin ligase *(SINA) & original description: CDS=60-1088	0.03	OrthoFinder output from all 47 species
Ehy_g05575	No alias	E3 ubiquitin ligase *(SINA) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01002793001	No alias	E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Ore_g16841	No alias	E3 ubiquitin ligase *(SINA) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g66313	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007275	multicellular organism development	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004379	glycylpeptide N-tetradecanoyltransferase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0019107	myristoyltransferase activity	IEP	HCCA
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	HCCA
MF	GO:0042887	amide transmembrane transporter activity	IEP	HCCA
MF	GO:1904680	peptide transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018121	7-in-absentia-prot_TRAF-dom	104	303

External Links

No external refs found!

Tin_g04518

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation