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  5. Tin_g03632

Tin_g03632


Description : not classified & original description: none


Gene families : OG0000766 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000766_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03632
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00174410 evm_27.TU.AmTr_v1... Uncharacterized protein At4g28440 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g079686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g029764 No alias not classified & original description: CDS=166-639 0.02 OrthoFinder output from all 47 species
Ceric.20G003500.1 Ceric.20G003500 not classified & original description: pacid=50566972... 0.03 OrthoFinder output from all 47 species
Ceric.36G029200.1 Ceric.36G029200 not classified & original description: pacid=50568759... 0.03 OrthoFinder output from all 47 species
Dac_g12224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g01050.2 LOC_Os05g01050 Uncharacterized protein At4g28440 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os05g15520.1 LOC_Os05g15520 Uncharacterized protein At4g28440 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g26962 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10427215g0010 No alias Uncharacterized protein At4g28440 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_122931g0010 No alias Uncharacterized protein At4g28440 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g12246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00450 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g20153 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009002 No alias not classified & original description: CDS=105-515 0.03 OrthoFinder output from all 47 species
Sam_g40428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!