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  5. Tin_g03476

Tin_g03476


Description : not classified & original description: none


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:

Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03476
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT3G04960 No alias Domain of unknown function (DUF3444) 0.04 OrthoFinder output from all 47 species
AT4G27980 No alias Domain of unknown function (DUF3444) 0.04 OrthoFinder output from all 47 species
Adi_g076083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21019 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g50827 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g07361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42055.t1 Aspi01Gene42055 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0011.g012737 No alias not classified & original description: CDS=1-2550 0.03 OrthoFinder output from all 47 species
Cba_g02679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z143700.1 Ceric.1Z143700 not classified & original description: pacid=50582097... 0.03 OrthoFinder output from all 47 species
Ceric.35G054500.1 Ceric.35G054500 not classified & original description: pacid=50580675... 0.03 OrthoFinder output from all 47 species
Ehy_g04806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017824001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01021980001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01030061001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g27740.3 LOC_Os01g27740 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g30620.3 LOC_Os02g30620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g29277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002387 No alias not classified & original description: CDS=1-2268 0.03 OrthoFinder output from all 47 species
Smo107796 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc07g047690.1.1 Solyc07g047690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e017660_P001 Zm00001e017660 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 68 121
IPR024593 DUF3444 458 657
No external refs found!