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  5. Tin_g03418

Tin_g03418 (SMU2)


Aliases : SMU2

Description : component *(SMU2) of SMU splicing factor complex & original description: none


Gene families : OG0004764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03418

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00259060 SMU2,... Suppressor of mec-8 and unc-52 protein homolog 2... 0.03 OrthoFinder output from all 47 species
Aob_g17901 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0121.g046872 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g04765 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g01347 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01015011001 SMU2 Suppressor of mec-8 and unc-52 protein homolog 2... 0.04 OrthoFinder output from all 47 species
Ore_g30538 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.03 OrthoFinder output from all 47 species
Sam_g39144 No alias component *(SMU2) of SMU splicing factor complex &... 0.02 OrthoFinder output from all 47 species
Solyc07g017490.3.1 SMU2, Solyc07g017490 Suppressor of mec-8 and unc-52 protein homolog 2... 0.03 OrthoFinder output from all 47 species
Spa_g08279 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR012492 RED_C 525 631
IPR012916 RED_N 91 305
No external refs found!