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  5. Tin_g03385

Tin_g03385


Description : component *(SCD2)of post-Golgi trafficking SCD complex & original description: none


Gene families : OG0003024 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003024_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03385

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00160930 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.post-Golgi... 0.03 OrthoFinder output from all 47 species
Als_g14795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02569 No alias component *(SCD2)of post-Golgi trafficking SCD complex &... 0.03 OrthoFinder output from all 47 species
Cba_g32677 No alias component *(SCD2)of post-Golgi trafficking SCD complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g03993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g70320.1 LOC_Os01g70320 SCD2 component of post-Golgi trafficking SCD complex 0.05 OrthoFinder output from all 47 species
Msp_g07311 No alias component *(SCD2)of post-Golgi trafficking SCD complex &... 0.05 OrthoFinder output from all 47 species
Smo438807 No alias Vesicle trafficking.endomembrane trafficking.post-Golgi... 0.04 OrthoFinder output from all 47 species
Zm00001e018754_P001 Zm00001e018754 SCD2 component of post-Golgi trafficking SCD complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
CC GO:0009349 riboflavin synthase complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!