Tin_g03256


Description : not classified & original description: none


Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03256

Target Alias Description ECC score Gene Family Method Actions
Adi_g039739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g56929 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32374.t1 SBP1, Aspi01Gene32374 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g08650 SBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G050000.1 SBP1, Ceric.02G050000 not classified & original description: pacid=50584162... 0.03 OrthoFinder output from all 47 species
Dac_g32199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g33928 SBP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020407001 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.02 OrthoFinder output from all 47 species
Gb_07205 SBP1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_15555 No alias Probable BOI-related E3 ubiquitin-protein ligase 2... 0.03 OrthoFinder output from all 47 species
LOC_Os04g32980.1 LOC_Os04g32980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g16938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09267 SBP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23571 SBP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007211 SBP1 not classified & original description: CDS=385-1452 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018517 No alias not classified & original description: CDS=1110-2285 0.04 OrthoFinder output from all 47 species
Smo103907 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.02 OrthoFinder output from all 47 species
Zm00001e008274_P001 Zm00001e008274 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005986 sucrose biosynthetic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0050307 sucrose-phosphate phosphatase activity IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!