Description : not classified & original description: none
Gene families : OG0003321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003321_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Tin_g02198 | |
Cluster | HCCA: Cluster_15 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00086p00132870 | evm_27.TU.AmTr_v1... | No description available | 0.05 | OrthoFinder output from all 47 species | |
AT3G47890 | No alias | Ubiquitin carboxyl-terminal hydrolase-related protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G47910 | No alias | Ubiquitin carboxyl-terminal hydrolase-related protein | 0.05 | OrthoFinder output from all 47 species | |
Adi_g058350 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g080721 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g04590 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g22460 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aop_g14015 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene09610.t1 | Aspi01Gene09610 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0327.g065237 | No alias | not classified & original description: CDS=1-5397 | 0.04 | OrthoFinder output from all 47 species | |
Ceric.1Z194000.1 | Ceric.1Z194000 | not classified & original description: pacid=50618972... | 0.06 | OrthoFinder output from all 47 species | |
Cre12.g508250 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Dac_g28933 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g04153 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g07008 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Ehy_g16619 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01008079001 | No alias | No description available | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g06950.1 | LOC_Os03g06950 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
Len_g49533 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Lfl_g12618 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_46922g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Msp_g13542 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Nbi_g05015 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g13760 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Sam_g24494 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g113370.3.1 | Solyc03g113370 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g071120.3.1 | Solyc06g071120 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e039017_P003 | Zm00001e039017 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEA | Interproscan |
BP | GO:0016579 | protein deubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | HCCA |
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0042393 | histone binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1903293 | phosphatase complex | IEP | HCCA |
No external refs found! |