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  5. Tin_g02188

Tin_g02188 (SRA1, KLK, PIR,...)


Aliases : SRA1, KLK, PIR, ATSRA1, PIRP, PIR121

Description : component *(PIROGI) of SCAR/WAVE ARP2/3-activaTing complex & original description: none


Gene families : OG0005627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005627_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02188

Target Alias Description ECC score Gene Family Method Actions
Aev_g08861 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.04 OrthoFinder output from all 47 species
Ala_g12486 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.04 OrthoFinder output from all 47 species
Als_g07499 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.04 OrthoFinder output from all 47 species
Ehy_g14087 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.03 OrthoFinder output from all 47 species
Pir_g11840 SRA1, KLK, PIR,... component *(PIROGI) of SCAR/WAVE ARP2/3-activating... 0.03 OrthoFinder output from all 47 species
Smo160351 SRA1, KLK, PIR,... Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0031267 small GTPase binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR008081 Cytoplasmic_FMR1-int 399 1250
IPR009828 CYRIA/CYRIB_Rac1-bd 156 280
No external refs found!