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  5. Tin_g00846

Tin_g00846


Description : not classified & original description: none


Gene families : OG0005855 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005855_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g00846

Target Alias Description ECC score Gene Family Method Actions
Adi_g059728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g15581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G078700.1 Ceric.01G078700 not classified & original description: pacid=50590639... 0.04 OrthoFinder output from all 47 species
Lfl_g03117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_100327g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_15363g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g12111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04687 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g12443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e014460_P003 Zm00001e014460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 259 273
IPR002048 EF_hand_dom 177 190
IPR002048 EF_hand_dom 303 365
No external refs found!