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  5. Tin_g00596

Tin_g00596


Description : not classified & original description: none


Gene families : OG0005280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g00596
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00070830 evm_27.TU.AmTr_v1... Uncharacterized Rho GTPase-activating protein At5g61530... 0.02 OrthoFinder output from all 47 species
AT5G61530 No alias small G protein family protein / RhoGAP family protein 0.04 OrthoFinder output from all 47 species
Ceric.07G087200.1 Ceric.07G087200 not classified & original description: pacid=50627874... 0.03 OrthoFinder output from all 47 species
Dac_g42739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g30300.1 LOC_Os07g30300 Uncharacterized Rho GTPase-activating protein At5g61530... 0.03 OrthoFinder output from all 47 species
MA_10223525g0010 No alias Uncharacterized Rho GTPase-activating protein At5g61530... 0.02 OrthoFinder output from all 47 species
Mp4g20730.1 No alias Uncharacterized Rho GTPase-activating protein At5g61530... 0.02 OrthoFinder output from all 47 species
Zm00001e034997_P001 Zm00001e034997 Uncharacterized Rho GTPase-activating protein At5g61530... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000198 RhoGAP_dom 166 305
No external refs found!