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  5. Tin_g00523

Tin_g00523 (YLMG2, ATYLMG2)


Aliases : YLMG2, ATYLMG2

Description : not classified & original description: none


Gene families : OG0002185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g00523
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00238310 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G21920 YLMG2, ATYLMG2 YGGT family protein 0.03 OrthoFinder output from all 47 species
Ala_g08970 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04100 YLMG2, ATYLMG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07670 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02771 YLMG2, ATYLMG2 not classified & original description: none 0.14 OrthoFinder output from all 47 species
Ceric.12G048700.1 YLMG2, ATYLMG2,... not classified & original description: pacid=50602487... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020510.71 YLMG2, ATYLMG2 No description available 0.01 OrthoFinder output from all 47 species
Cre02.g080250 YLMG1-2, ATYLMG1-2 No description available 0.01 OrthoFinder output from all 47 species
Cre12.g557050 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
Dac_g31838 YLMG2, ATYLMG2 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g09359 YLMG2, ATYLMG2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g10748 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02100 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_33767 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g08080.1 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g05180 YLMG2, ATYLMG2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g18155 emb1990,... plastid-nucleoid partitioning factor *(YLMG1) & original... 0.1 OrthoFinder output from all 47 species
Lfl_g05213 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_9458287g0010 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g13060.1 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g10281 YLMG2, ATYLMG2 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g11258 YLMG2, ATYLMG2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g18598 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18599 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11582 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06607 YLMG2, ATYLMG2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g31514 YLMG2, ATYLMG2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014630 YLMG1-2, ATYLMG1-2 plastid-nucleoid partitioning factor *(YLMG1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g06521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g061630.3.1 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Spa_g10431 YLMG2, ATYLMG2 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e000570_P001 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e038876_P002 Zm00001e038876 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003425 CCB3/YggT 129 193
No external refs found!