1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g62201

Pir_g62201 (ERF-1, ATERF-1)


Aliases : ERF-1, ATERF-1

Description : subgroup ERF-IX transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g62201

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00133970 ERF72, EBP,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00194910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G43160 RAP2.6 related to AP2 6 0.03 OrthoFinder output from all 47 species
AT1G64380 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G14230 RAP2.2 related to AP2 2 0.04 OrthoFinder output from all 47 species
AT4G28140 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G50080 ERF110 ethylene response factor 110 0.03 OrthoFinder output from all 47 species
Adi_g022278 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053440 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g057545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02279 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g04879 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24731 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07025 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g14106 DEAR2 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Als_g10573 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g16374 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g30791 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Als_g58152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01030 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g14725 CRF4 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22167.t1 TMO3, CRF2,... subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025685 No alias subgroup ERF-VI transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0096.g043715 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0398.g068193 No alias subgroup ERF-I transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g20722 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G055400.1 Ceric.10G055400 not classified & original description: pacid=50611842... 0.04 OrthoFinder output from all 47 species
Ceric.19G006100.1 HRE2, Ceric.19G006100 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.24G043300.1 Ceric.24G043300 not classified & original description: pacid=50629223... 0.03 OrthoFinder output from all 47 species
Ceric.28G014900.1 Ceric.28G014900 subgroup ERF-I transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G045200.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g02023 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g07566 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14308 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23248 RAP2.4 subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15103 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g47255 No alias subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g52058 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g03378 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g11454 ERF-1, ATERF-1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11833 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ehy_g29593 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g29688 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01002195001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01009007001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01035852001 SHN3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_08382 RAP2.9, DEAR5 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_08541 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_41433 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os01g10370.1 tny, LOC_Os01g10370 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g06330.1 ATERF4, RAP2.5,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g09650.1 ATERF3, ERF3,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08470.1 RAP2.12, LOC_Os03g08470 Ethylene-responsive transcription factor 1 OS=Oryza... 0.02 OrthoFinder output from all 47 species
LOC_Os04g57340.1 ATERF3, ERF3,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os09g39810.1 LOC_Os09g39810 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Lfl_g06554 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
MA_15000g0010 No alias Ethylene-responsive transcription factor ERF017... 0.02 OrthoFinder output from all 47 species
MA_65877g0010 No alias Dehydration-responsive element-binding protein 3... 0.02 OrthoFinder output from all 47 species
MA_69434g0020 ERF-1, ATERF-1 Ethylene-responsive transcription factor 1 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Msp_g20272 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Nbi_g20998 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g27584 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g38776 ERF-1, ATERF-1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07476 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010831 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025602 No alias subgroup ERF-V transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc01g090370.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc07g049490.3.1 ERF7, ATERF7,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc09g091950.1.1 Solyc09g091950 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc10g006130.1.1 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Spa_g14734 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30191 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g52658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08822 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000609_P001 RAP2.2, Zm00001e000609 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e004208_P001 Zm00001e004208 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e023078_P001 Zm00001e023078 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e023686_P001 Zm00001e023686 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e024001_P001 Zm00001e024001 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025064_P001 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e030279_P001 ATERF3, ERF3,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e036260_P001 RAP2.12, Zm00001e036260 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e038888_P001 Zm00001e038888 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 391 441
No external refs found!