Pir_g61967 (COX2)


Aliases : COX2

Description : component *(COX2) of cytochrome c oxidase complex & original description: none


Gene families : OG0003824 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003824_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g61967
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s04574p00000060 evm_27.TU.AmTr_v1... Cytochrome c oxidase subunit 2 OS=Triticum aestivum 0.03 OrthoFinder output from all 47 species
AMTR_s04574p00001800 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s05659p00002430 evm_27.TU.AmTr_v1... Cytochrome c oxidase subunit 2 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
ATMG00160 COX2 cytochrome oxidase 2 0.05 OrthoFinder output from all 47 species
ATMG01280 ORF291 Cytochrome C oxidase subunit II-like, transmembrane domain 0.06 OrthoFinder output from all 47 species
Aob_g30221 COX2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31753 COX2 not classified & original description: none 0.2 OrthoFinder output from all 47 species
Ceric.04G095700.1 Ceric.04G095700 not classified & original description: pacid=50630898... 0.05 OrthoFinder output from all 47 species
Ceric.1Z125800.1 Ceric.1Z125800 not classified & original description: pacid=50604566... 0.06 OrthoFinder output from all 47 species
Ceric.1Z126200.1 COX2, Ceric.1Z126200 not classified & original description: pacid=50604572... 0.11 OrthoFinder output from all 47 species
Ceric.1Z257900.1 COX2, Ceric.1Z257900 not classified & original description: pacid=50586471... 0.21 OrthoFinder output from all 47 species
Ceric.1Z261900.1 COX2, Ceric.1Z261900 not classified & original description: pacid=50628405... 0.12 OrthoFinder output from all 47 species
Ceric.1Z314100.1 Ceric.1Z314100 not classified & original description: pacid=50567672... 0.06 OrthoFinder output from all 47 species
Ceric.1Z318500.1 Ceric.1Z318500 not classified & original description: pacid=50579280... 0.06 OrthoFinder output from all 47 species
Cre03.g154350 COX2 Cytochrome c oxidase subunit 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dde_g00367 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09391 COX2 component *(COX2) of cytochrome c oxidase complex &... 0.25 OrthoFinder output from all 47 species
GSVIVT01006909001 COX2 Cytochrome c oxidase subunit 2 OS=Glycine max 0.05 OrthoFinder output from all 47 species
Gb_08948 COX2 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.07 OrthoFinder output from all 47 species
Gb_17117 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_17977 COX2 Cytochrome c oxidase subunit 2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Gb_26512 COX2 Cytochrome c oxidase subunit 2 OS=Glycine max... 0.03 OrthoFinder output from all 47 species
Gb_34804 No alias Cytochrome c oxidase subunit 2 OS=Glycine max... 0.07 OrthoFinder output from all 47 species
MA_10435550g0020 COX2 Cytochrome c oxidase subunit 2 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_10436044g0020 COX2 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 OrthoFinder output from all 47 species
Mp4g18480.1 No alias Cytochrome c oxidase subunit 2 OS=Marchantia polymorpha... 0.09 OrthoFinder output from all 47 species
Nbi_g26482 No alias not classified & original description: none 0.22 OrthoFinder output from all 47 species
Sam_g36762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo38815 No alias Cytochrome c oxidase subunit 2 OS=Marchantia polymorpha 0.04 OrthoFinder output from all 47 species
Solyc00g500101.1.1 COX2, Solyc00g500101 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 OrthoFinder output from all 47 species
Solyc00g500118.1.1 COX2, Solyc00g500118 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 OrthoFinder output from all 47 species
Solyc00g500244.1.1 COX2, Solyc00g500244 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 OrthoFinder output from all 47 species
Solyc00g500275.1.1 COX2, Solyc00g500275 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 OrthoFinder output from all 47 species
Solyc00g500359.1.1 COX2, Solyc00g500359 Cytochrome c oxidase subunit 2 OS=Beta vulgaris... 0.03 OrthoFinder output from all 47 species
Spa_g21715 COX2 not classified & original description: none 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEA Interproscan
MF GO:0005507 copper ion binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011759 Cyt_c_oxidase_su2_TM_dom 2 73
IPR002429 CcO_II-like_C 85 209
No external refs found!