Pir_g59325

Description : component *(bS21c) of small plastid ribosomal-subunit proteome & original description: none

Gene families : OG0004103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004103_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g59325
Cluster	HCCA: Cluster_226

Target	Alias	Description	ECC score	Gene Family Method
AT3G27160	GHS1	Ribosomal protein S21 family protein	0.04	OrthoFinder output from all 47 species
Aev_g09196	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Azfi_s0003.g007465	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Cba_g02864	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Cre01.g017300	No alias	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Dcu_g41032	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Dde_g05601	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
LOC_Os02g09590.1	GHS1, LOC_Os02g09590	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.02	OrthoFinder output from all 47 species
Len_g15740	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Mp4g21580.1	No alias	component mtRPS21\|psRPS21 of mitochondrial ribosome...	0.02	OrthoFinder output from all 47 species
Msp_g36586	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Ore_g01870	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Ore_g05303	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Spa_g18473	No alias	component *(bS21c) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003697	single-stranded DNA binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	HCCA
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	HCCA
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001911	Ribosomal_S21	126	179

External Links

No external refs found!

Pir_g59325

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation