Pir_g56619 (WRKY39, ATWRKY39)

Aliases : WRKY39, ATWRKY39

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g56619

Target	Alias	Description	ECC score	Gene Family Method
Adi_g009825	No alias	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g12302	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g33845	WRKY21	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g76166	WRKY74, ATWRKY74	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g16824	WRKY15	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g51173	WRKY14, AR411, ATWRKY14	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os03g58420.1	WRKY21, LOC_Os03g58420	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os05g50700.1	WRKY22,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Len_g11934	ATWRKY11, WRKY11	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g28236	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc08g081610.4.1	ATWRKY29,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Spa_g51490	WRKY15	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g12364	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	HCCA
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	499	555
IPR018872	Zn-cluster-dom	452	495

External Links

No external refs found!

Pir_g56619 (WRKY39, ATWRKY39)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation