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  5. Pir_g50837

Pir_g50837


Description : not classified & original description: none


Gene families : OG0001409 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001409_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g50837

Target Alias Description ECC score Gene Family Method Actions
Ehy_g27375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g42190.1 LOC_Os01g42190 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g09560.1 LOC_Os06g09560 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g35160.2 LOC_Os08g35160 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g18074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g075470.2.1 Solyc09g075470 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e036255_P001 Zm00001e036255 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 11 79
No external refs found!