Aliases : RHC1A
Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: none
Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pir_g50355 | |
Cluster | HCCA: Cluster_142 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G18780 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT2G29840 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT3G13228 | No alias | RING/U-box superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
Adi_g012553 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
Adi_g066616 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g05358 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g07224 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0185.g056585 | No alias | not classified & original description: CDS=1-1950 | 0.06 | OrthoFinder output from all 47 species | |
Cba_g73123 | AIP2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.27G002200.1 | Ceric.27G002200 | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000880.42 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
Ehy_g01160 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g14500 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01008897001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
Len_g20588 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
Lfl_g31373 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Msp_g34982 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g15631 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g06797 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
Pnu_g26717 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0036.g011589 | No alias | not classified & original description: CDS=1-987 | 0.01 | OrthoFinder output from all 47 species | |
Sam_g17099 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0061630 | ubiquitin protein ligase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
MF | GO:0004506 | squalene monooxygenase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005506 | iron ion binding | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | HCCA |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
MF | GO:0020037 | heme binding | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |