Aliases : SPL7, ATSPL7
Description : regulatory protein *(SPL7) of copper homeostasis & original description: none
Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pir_g49101 | |
Cluster | HCCA: Cluster_66 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00062p00211520 | SPL4,... | RNA biosynthesis.transcriptional activation.SBP... | 0.03 | OrthoFinder output from all 47 species | |
AT1G02065 | SPL8 | squamosa promoter binding protein-like 8 | 0.02 | OrthoFinder output from all 47 species | |
AT2G33810 | SPL3 | squamosa promoter binding protein-like 3 | 0.03 | OrthoFinder output from all 47 species | |
AT3G15270 | SPL5 | squamosa promoter binding protein-like 5 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g077071 | SPL8 | SBP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene27773.t1 | SPL3, Aspi01Gene27773 | SBP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g32859 | SPL2 | SBP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cre02.g104700 | SPL2 | RNA biosynthesis.transcriptional activation.SBP... | 0.02 | OrthoFinder output from all 47 species | |
Cre16.g686100 | No alias | RNA biosynthesis.transcriptional activation.SBP... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g16262 | SPL2 | SBP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g23320 | SPL2 | SBP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g46580.1 | SPL3, LOC_Os04g46580 | transcription factor (SBP) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g56170.1 | SPL8, LOC_Os04g56170 | transcription factor (SBP) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os06g44860.1 | SPL8, LOC_Os06g44860 | transcription factor (SBP) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g39890.1 | AtSPL9, SPL9,... | transcription factor (SBP) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g31438.1 | AtSPL9, SPL9,... | transcription factor (SBP) | 0.02 | OrthoFinder output from all 47 species | |
Mp1g10030.1 | SPL2 | transcription factor (SBP) | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g07869 | SPL2 | SBP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g25306 | No alias | SBP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g24495 | No alias | SBP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g18143 | SPL3 | SBP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g018780.3.1 | SPL8, Solyc10g018780 | transcription factor (SBP) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g38749 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010067_P001 | AtSPL9, SPL9,... | transcription factor (SBP) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e018817_P003 | SPL13, SPL13A,... | transcription factor (SBP) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e021425_P001 | SPL13, SPL13A,... | transcription factor (SBP) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e025234_P001 | SPL2, Zm00001e025234 | transcription factor (SBP) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e028442_P002 | SPL13, SPL13A,... | transcription factor (SBP) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e034537_P001 | AtSPL9, SPL9,... | transcription factor (SBP) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003729 | mRNA binding | IEP | HCCA |
MF | GO:0003872 | 6-phosphofructokinase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
CC | GO:0005849 | mRNA cleavage factor complex | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006378 | mRNA polyadenylation | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
MF | GO:0008443 | phosphofructokinase activity | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0019200 | carbohydrate kinase activity | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0043631 | RNA polyadenylation | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004333 | SBP_dom | 221 | 295 |
No external refs found! |