- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : C2H2-type subclass ZAT transcription factor & original description: none
Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pir_g48975 | |
| Cluster | HCCA: Cluster_182 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00137p00104280 | AZF3, ZF3,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G46080 | No alias | C2H2-type zinc finger family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G49930 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G43170 | AZF3, ZF3 | zinc-finger protein 3 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G59820 | RHL41, ZAT12 | C2H2-type zinc finger family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G61470 | No alias | C2H2-like zinc finger protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036105 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19801 | No alias | C2H2-type subclass ZAT transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0152.g053433 | No alias | C2H2-type subclass ZAT transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_10422 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Gb_16414 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g32230.1 | CZF2, ZAT6,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g55540.1 | CZF2, ZAT6,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g02390.1 | RHL41, ZAT12,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g40080.1 | CZF2, ZAT6,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g20580.1 | AZF1, ZF1, LOC_Os08g20580 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g39400.1 | ZAT10, STZ,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_160930g0020 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_19127g0010 | CZF2, ZAT6, C2H2 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| MA_70076g0010 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_837209g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_858691g0010 | No alias | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| MA_93487g0010 | No alias | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g27134 | No alias | regulatory protein *(DAZ) of male germ cell division &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008606 | No alias | regulatory protein *(DAZ) of male germ cell division &... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g107170.2.1 | CZF2, ZAT6,... | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g075775.1.1 | Solyc06g075775 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g075780.3.1 | Solyc06g075780 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g072210.1.1 | Solyc11g072210 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g073055.1.1 | Solyc11g073055 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g073075.1.1 | Solyc11g073075 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g15487 | No alias | regulatory protein *(DAZ) of male germ cell division &... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g37939 | No alias | regulatory protein *(DAZ) of male germ cell division &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002022_P001 | Zm00001e002022 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002063_P001 | AZF1, ZF1, Zm00001e002063 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005777_P001 | CZF2, ZAT6,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e011755_P001 | AZF1, ZF1, Zm00001e011755 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011983_P001 | CZF2, ZAT6,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023171_P001 | Zm00001e023171 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| CC | GO:0005875 | microtubule associated complex | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0007017 | microtubule-based process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| CC | GO:0030286 | dynein complex | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |