Aliases : ATFLA11, FLA11
Description : Fasciclin-type arabinogalactan protein & original description: none
Gene families : OG0000997 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000997_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pir_g48472 | |
Cluster | HCCA: Cluster_109 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00224100 | FLA7,... | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00007p00166710 | ATFLA11, FLA11,... | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.03 | OrthoFinder output from all 47 species | |
AT2G04780 | FLA7 | FASCICLIN-like arabinoogalactan 7 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g052058 | FLA7 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01025167001 | ATFLA11, FLA11 | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01025662001 | ATFLA11, FLA11 | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01025671001 | ATFLA11, FLA11 | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g06580.1 | ATFLA11, FLA11,... | fasciclin-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g47780.1 | ATFLA11, FLA11,... | fasciclin-type arabinogalactan protein | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g48900.1 | FLA13, LOC_Os05g48900 | fasciclin-type arabinogalactan protein | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g05640 | No alias | Fasciclin-type arabinogalactan protein & original... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g23485 | FLA12 | Fasciclin-type arabinogalactan protein & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g55120 | ATFLA11, FLA11 | Fasciclin-type arabinogalactan protein & original... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0108.g020398 | ATFLA11, FLA11 | not classified & original description: CDS=1-771 | 0.05 | OrthoFinder output from all 47 species | |
Solyc07g048090.2.1 | FLA7, Solyc07g048090 | fasciclin-type arabinogalactan protein | 0.04 | OrthoFinder output from all 47 species | |
Solyc09g007650.3.1 | ATFLA11, FLA11,... | fasciclin-type arabinogalactan protein | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e016840_P001 | ATFLA11, FLA11,... | fasciclin-type arabinogalactan protein | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e020209_P002 | ATFLA11, FLA11,... | fasciclin-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e024362_P001 | FLA7, Zm00001e024362 | fasciclin-type arabinogalactan protein | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e026526_P001 | FLA9, Zm00001e026526 | fasciclin-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032425_P001 | FLA6, Zm00001e032425 | Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
MF | GO:0010181 | FMN binding | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
MF | GO:0032182 | ubiquitin-like protein binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043130 | ubiquitin binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000782 | FAS1_domain | 76 | 211 |
No external refs found! |