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  5. Pir_g40622

Pir_g40622


Description : not classified & original description: none


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g40622
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00250200 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00056p00089620 No alias TMV resistance protein N OS=Nicotiana glutinosa 0.03 OrthoFinder output from all 47 species
AMTR_s00060p00214220 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00126980 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G27170 No alias transmembrane receptors;ATP binding 0.03 OrthoFinder output from all 47 species
AT1G31540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G56510 WRR4, ADR2 Disease resistance protein (TIR-NBS-LRR class) 0.04 OrthoFinder output from all 47 species
AT1G56540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT1G63750 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G63860 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT1G65850 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT3G25505 No alias No description available 0.04 OrthoFinder output from all 47 species
AT4G08450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G38340 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G41540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G58120 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
Adi_g055906 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32850 LAZ5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45503.t1 LAZ5, Aspi01Gene45503 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g31962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G016100.1 Ceric.15G016100 not classified & original description: pacid=50640408... 0.04 OrthoFinder output from all 47 species
Dde_g40335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27274 LAZ5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01025907001 TAO1 External stimuli response.biotic stress.pathogen... 0.05 OrthoFinder output from all 47 species
GSVIVT01026099001 No alias External stimuli response.biotic stress.pathogen... 0.02 OrthoFinder output from all 47 species
GSVIVT01036304001 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
Gb_02871 No alias Disease resistance-like protein DSC1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_04749 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
Gb_05909 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.05 OrthoFinder output from all 47 species
Gb_07499 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_12319 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_17461 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_20740 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_23307 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_27878 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
Gb_32215 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_40939 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10425865g0020 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_10427224g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
MA_10428569g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10432315g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_10432475g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
MA_123242g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_135183g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_408380g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_5053586g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_662972g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_705541g0010 CSA1 effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_7864385g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
MA_9108027g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
MA_97184g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_9873718g0020 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Pir_g41609 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g42612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43268 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44077 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g45582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51654 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g113620.3.1 Solyc01g113620 effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Solyc02g082050.3.1 Solyc02g082050 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc04g007320.3.1 Solyc04g007320 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc05g006630.4.1 Solyc05g006630 Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc05g007850.2.1 Solyc05g007850 effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
Solyc07g055380.1.1 Solyc07g055380 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Solyc07g063360.1.1 Solyc07g063360 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc11g011090.1.1 Solyc11g011090 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Solyc11g011350.3.1 Solyc11g011350 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc12g096900.2.1 AtPP2-B10,... effector receptor (NLR) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 112 326
IPR000157 TIR_dom 2 92
No external refs found!