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  5. Pir_g33779

Pir_g33779 (RIN4)


Aliases : RIN4

Description : regulatory factor *(RIN4) guarded by RPM1/RPS2 activities & original description: none


Gene families : OG0000509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000509_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g33779
Cluster HCCA: Cluster_228

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00074p00139690 RIN4,... External stimuli response.biotic stress.pathogen... 0.02 OrthoFinder output from all 47 species
Dde_g18230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_33340 NOI no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os03g63140.1 RIN4, LOC_Os03g63140 RIN4 effector-triggered immunity RPM1-interacting factor 0.03 OrthoFinder output from all 47 species
Len_g15816 NOI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62336 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010395 No alias not classified & original description: CDS=1-855 0.03 OrthoFinder output from all 47 species
Solyc11g012010.2.1 RIN4, Solyc11g012010 RIN4 effector-triggered immunity RPM1-interacting factor 0.04 OrthoFinder output from all 47 species
Spa_g09622 RIN4 regulatory factor *(RIN4) guarded by RPM1/RPS2... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR008700 TypeIII_avirulence_cleave 81 113
IPR008700 TypeIII_avirulence_cleave 230 265
No external refs found!