Aliases : FIB
Description : Fibrillin plastoglobule core protein *(FBN1/2) & original description: none
Gene families : OG0002240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002240_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pir_g28944 | |
Cluster | HCCA: Cluster_225 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g48636 | No alias | Fibrillin plastoglobule core protein *(FBN1/2) &... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020943.18 | No alias | Plastoglobulin-1, chloroplastic OS=Pisum sativum | 0.01 | OrthoFinder output from all 47 species | |
Solyc08g076480.3.1 | Solyc08g076480 | Probable plastid-lipid-associated protein 3,... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
MF | GO:0000976 | transcription cis-regulatory region binding | IEP | HCCA |
MF | GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding | IEP | HCCA |
MF | GO:0001067 | transcription regulatory region nucleic acid binding | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | HCCA |
CC | GO:0005839 | proteasome core complex | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0032422 | purine-rich negative regulatory element binding | IEP | HCCA |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006843 | PAP/fibrillin_dom | 61 | 198 |
No external refs found! |