Pir_g27766

Description : component *(eL34) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000940 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000940_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g27766
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00260730	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
AT1G26880	No alias	Ribosomal protein L34e superfamily protein	0.04	OrthoFinder output from all 47 species
AT1G69620	RPL34	ribosomal protein L34	0.04	OrthoFinder output from all 47 species
AT3G28900	No alias	Ribosomal protein L34e superfamily protein	0.04	OrthoFinder output from all 47 species
Adi_g107643	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Aob_g25976	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g53636	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Azfi_s0045.g029897	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Cre16.g661050	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Dac_g02443	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Dde_g15490	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Mp4g17040.1	No alias	component RPL34 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Pp3c11_2940V3.1	RPL34, Pp3c11_2940	Ribosomal protein L34e superfamily protein	0.01	OrthoFinder output from all 47 species
Pp3c1_1800V3.1	RPL34, Pp3c1_1800	Ribosomal protein L34e superfamily protein	0.01	OrthoFinder output from all 47 species
Pp3c25_11980V3.1	Pp3c25_11980	Ribosomal protein L34e superfamily protein	0.03	OrthoFinder output from all 47 species
Pp3c7_21380V3.1	Pp3c7_21380	Ribosomal protein L34e superfamily protein	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000708	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g41835	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Solyc05g007560.3.1	Solyc05g007560	component RPL34 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Solyc06g069860.4.1	Solyc06g069860	component RPL34 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Spa_g28558	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Spa_g37008	No alias	component *(eL34) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008195	Ribosomal_L34Ae	1	96

External Links

No external refs found!

Pir_g27766

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation