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  5. Pir_g27379

Pir_g27379


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g27379

Target Alias Description ECC score Gene Family Method Actions
AT5G42050 No alias DCD (Development and Cell Death) domain protein 0.03 OrthoFinder output from all 47 species
Adi_g095728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G024600.1 Ceric.35G024600 not classified & original description: pacid=50580868... 0.03 OrthoFinder output from all 47 species
Dac_g17044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17982 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g094130.3.1 Solyc02g094130 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 268.0) 0.03 OrthoFinder output from all 47 species
Spa_g04772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g05292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g34473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 114 239
No external refs found!