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  5. Pir_g24908

Pir_g24908 (JAZ12, TIFY3B)


Aliases : JAZ12, TIFY3B

Description : TIFY-type transcription factor & original description: none


Gene families : OG0000154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g24908
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Ala_g04395 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26899 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G064200.1 JAI3, JAZ3,... TIFY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os04g55920.1 JAZ12, TIFY3B,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Len_g05169 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_6488844g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g06230.1 JAI3, JAZ3, TIFY6B transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Msp_g37651 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43497 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09805 JAI3, JAZ3, TIFY6B not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018467 CCT_CS 152 176
IPR010399 Tify_dom 65 97
No external refs found!