Pir_g22538 (KCS4)

Aliases : KCS4

Description : 3-ketoacyl-CoA synthase *(KCS) & original description: none

Gene families : OG0000066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g22538

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00182480	KCS4,...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.01	OrthoFinder output from all 47 species
AT4G34510	KCS17	3-ketoacyl-CoA synthase 17	0.03	OrthoFinder output from all 47 species
Aob_g19922	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g07194	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g13321	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0041.g026693	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1521	0.02	OrthoFinder output from all 47 species
Azfi_s0171.g055663	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1524	0.02	OrthoFinder output from all 47 species
Cba_g17241	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g36875	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g47176	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01013708001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	OrthoFinder output from all 47 species
Gb_32625	KCS11	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
LOC_Os03g12030.1	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase (KCS)	0.01	OrthoFinder output from all 47 species
Len_g54968	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g05483	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g12655	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g16182	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g37506	KCS11	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_415118g0020	KCS11	3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_759169g0010	KCS10, FDH	3-ketoacyl-CoA synthase (KCS)	0.01	OrthoFinder output from all 47 species
Nbi_g06189	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g10551	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g13333	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g06539	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g41434	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g56765	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g26106	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.01	OrthoFinder output from all 47 species
Ppi_g09046	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015383	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1527	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	409	491
IPR013601	FAE1_typ3_polyketide_synth	106	394

External Links

No external refs found!

Pir_g22538 (KCS4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation