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  5. Pir_g20435

Pir_g20435


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g20435
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AT4G21330 DYT1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g018971 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009209 ATBHLH029,... bHLH-type transcription factor & original description: CDS=1-1536 0.03 OrthoFinder output from all 47 species
Dcu_g32381 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09255 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31340 ATBHLH029,... bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
MA_833677g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Nbi_g31850 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g02622 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19879 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27625 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46311 AMS bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0030688 preribosome, small subunit precursor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 133 160
No external refs found!