Pir_g19717


Description : LIM-type transcription factor & original description: none


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19717

Target Alias Description ECC score Gene Family Method Actions
Als_g02798 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g00402 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55548 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16596 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g007940.4.1 Solyc08g007940 transcription factor (LIM) 0.03 OrthoFinder output from all 47 species
Spa_g01071 No alias LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018310_P001 WLIM1, Zm00001e018310 transcription factor (LIM) 0.02 OrthoFinder output from all 47 species
Zm00001e029431_P002 WLIM1, Zm00001e029431 transcription factor (LIM) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0003333 amino acid transmembrane transport IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 112 167
IPR001781 Znf_LIM 10 65
No external refs found!