1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g18861

Pir_g18861


Description : microtubule-stabilizing factor *(WDL) & original description: none


Gene families : OG0000418 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000418_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g18861
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00263250 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.microtubule... 0.03 OrthoFinder output from all 47 species
AMTR_s00004p00160730 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.microtubule... 0.02 OrthoFinder output from all 47 species
AT4G32330 No alias TPX2 (targeting protein for Xklp2) protein family 0.03 OrthoFinder output from all 47 species
Adi_g114961 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Aev_g33020 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Aev_g35230 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Ala_g05185 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Ala_g08064 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Ala_g25469 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Als_g15327 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Aob_g32079 No alias microtubule-stabilizing factor *(WDL) & original... 0.07 OrthoFinder output from all 47 species
Aop_g12096 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Aop_g60287 No alias microtubule-stabilizing factor *(WDL) & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0099.g044176 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.37G023300.1 Ceric.37G023300 microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Dac_g22186 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g20187 No alias microtubule-stabilizing factor *(WDL) & original... 0.06 OrthoFinder output from all 47 species
Dde_g07182 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g01370 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g13552 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16334 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g19384 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01015552001 No alias Cytoskeleton.microtubular network.microtubule... 0.03 OrthoFinder output from all 47 species
GSVIVT01018122001 No alias Cytoskeleton.microtubular network.microtubule... 0.03 OrthoFinder output from all 47 species
GSVIVT01036233001 No alias Cytoskeleton.microtubular network.microtubule... 0.03 OrthoFinder output from all 47 species
Gb_12105 No alias microtubule-stabilizing factor (WDL) 0.07 OrthoFinder output from all 47 species
LOC_Os03g58480.1 LOC_Os03g58480 microtubule-stabilizing factor (WDL) 0.03 OrthoFinder output from all 47 species
Len_g31668 No alias microtubule-stabilizing factor *(WDL) & original... 0.05 OrthoFinder output from all 47 species
Len_g48036 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
MA_10430896g0020 No alias microtubule-stabilizing factor (WDL) 0.03 OrthoFinder output from all 47 species
MA_46848g0010 No alias microtubule-stabilizing factor (WDL) 0.04 OrthoFinder output from all 47 species
Mp7g06100.1 No alias microtubule-stabilizing factor (WDL) 0.04 OrthoFinder output from all 47 species
Msp_g07370 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Msp_g13406 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Msp_g19406 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Msp_g48627 No alias microtubule-stabilizing factor *(WDL) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g06862 No alias microtubule-stabilizing factor *(WDL) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g07232 No alias microtubule-stabilizing factor *(WDL) & original... 0.07 OrthoFinder output from all 47 species
Ore_g44182 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g28684 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g63295 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014818 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Sam_g10590 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Sam_g18949 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Smo38526 No alias Cytoskeleton.microtubular network.microtubule... 0.02 OrthoFinder output from all 47 species
Solyc06g066030.4.1 Solyc06g066030 microtubule-stabilizing factor (WDL) 0.03 OrthoFinder output from all 47 species
Solyc09g083400.3.1 Solyc09g083400 microtubule-stabilizing factor (WDL) 0.03 OrthoFinder output from all 47 species
Spa_g07052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21201 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Spa_g29240 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Spa_g30104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30848 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Tin_g08825 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Tin_g46006 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e021245_P001 Zm00001e021245 microtubule-stabilizing factor (WDL) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR027329 TPX2_C 326 396
No external refs found!