Pir_g18284 (AtWRKY20, WRKY20)

Aliases : AtWRKY20, WRKY20

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g18284

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00090300	WRKY4,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00061p00050690	WRKY2, ATWRKY2,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Adi_g058352	WRKY3	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g18287	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g31865	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.12G025600.1	AtWRKY20,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.13G001000.1	WRKY3, Ceric.13G001000	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.28G003100.1	WRKY31,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.35G059800.1	WRKY6, ATWRKY6,...	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
GSVIVT01001332001	WRKY3	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Gb_32055	AtWRKY20, WRKY20	transcription factor (WRKY). transcription factor (WRKY33)	0.03	OrthoFinder output from all 47 species
LOC_Os07g39480.1	AtWRKY20,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os08g17400.1	WRKY4, LOC_Os08g17400	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Lfl_g08941	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_3469g0010	WRKY2, ATWRKY2	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Ore_g11298	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g20596	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g18765	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc12g006170.2.1	AtWRKY20,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Spa_g26807	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e035385_P002	AtWRKY20,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e038062_P002	WRKY4, Zm00001e038062	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
MF	GO:0017025	TBP-class protein binding	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
MF	GO:0140296	general transcription initiation factor binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	354	410
IPR003657	WRKY_dom	522	578

External Links

No external refs found!

Pir_g18284 (AtWRKY20, WRKY20)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation