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  5. Pir_g17728

Pir_g17728


Description : not classified & original description: none


Gene families : OG0002772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002772_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g17728

Target Alias Description ECC score Gene Family Method Actions
Adi_g055278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g084450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11845 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Cba_g25123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.22G054900.1 Ceric.22G054900 not classified & original description: pacid=50613856... 0.07 OrthoFinder output from all 47 species
Ceric.28G070300.1 Ceric.28G070300 not classified & original description: pacid=50570897... 0.1 OrthoFinder output from all 47 species
Dac_g00935 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g05688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g11843 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013175 No alias not classified & original description: CDS=68-2116 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0186.g025066 No alias not classified & original description: CDS=324-2297 0.03 OrthoFinder output from all 47 species
Sam_g08343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27212 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g00459 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g09557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21963 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR029479 Nitroreductase 172 300
No external refs found!