Description : not classified & original description: none
Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pir_g14223 | |
Cluster | HCCA: Cluster_37 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g02334 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000737.24 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Dac_g07047 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g06557 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo126152 | No alias | Pentatricopeptide repeat-containing protein At1g09410,... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000272 | polysaccharide catabolic process | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0005215 | transporter activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015297 | antiporter activity | IEP | HCCA |
MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016160 | amylase activity | IEP | HCCA |
MF | GO:0016161 | beta-amylase activity | IEP | HCCA |
BP | GO:0016485 | protein processing | IEP | HCCA |
MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
BP | GO:0055085 | transmembrane transport | IEP | HCCA |
BP | GO:0071586 | CAAX-box protein processing | IEP | HCCA |
MF | GO:0071949 | FAD binding | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 431 | 480 |
IPR002885 | Pentatricopeptide_repeat | 365 | 410 |
IPR002885 | Pentatricopeptide_repeat | 294 | 340 |
IPR002885 | Pentatricopeptide_repeat | 711 | 760 |
IPR002885 | Pentatricopeptide_repeat | 537 | 585 |
IPR002885 | Pentatricopeptide_repeat | 606 | 653 |
IPR002885 | Pentatricopeptide_repeat | 673 | 705 |
IPR002885 | Pentatricopeptide_repeat | 253 | 284 |
IPR002885 | Pentatricopeptide_repeat | 145 | 199 |
No external refs found! |