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  5. Pir_g12090

Pir_g12090 (PMDH1)


Aliases : PMDH1

Description : peroxisomal NAD-dependent malate dehydrogenase & original description: none


Gene families : OG0000664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12090
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT1G53240 mMDH1 Lactate/malate dehydrogenase family protein 0.03 OrthoFinder output from all 47 species
AT5G09660 PMDH2 peroxisomal NAD-malate dehydrogenase 2 0.13 OrthoFinder output from all 47 species
Aev_g01101 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.09 OrthoFinder output from all 47 species
Ala_g01385 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.08 OrthoFinder output from all 47 species
Als_g06082 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.08 OrthoFinder output from all 47 species
Aop_g00482 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.11 OrthoFinder output from all 47 species
Aspi01Gene69164.t1 PMDH1, Aspi01Gene69164 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g02437 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.12 OrthoFinder output from all 47 species
Ceric.28G009700.1 PMDH1, Ceric.28G009700 peroxisomal NAD-dependent malate dehydrogenase &... 0.11 OrthoFinder output from all 47 species
Dac_g23577 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.02 OrthoFinder output from all 47 species
Dcu_g01037 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.06 OrthoFinder output from all 47 species
Dde_g20852 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.1 OrthoFinder output from all 47 species
Ehy_g00867 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.05 OrthoFinder output from all 47 species
GSVIVT01036965001 PMDH1 Lipid metabolism.lipid degradation.fatty acid... 0.12 OrthoFinder output from all 47 species
Gb_00793 PMDH1 peroxisomal NAD-dependent malate dehydrogenase 0.06 OrthoFinder output from all 47 species
LOC_Os03g56280.1 PMDH1, LOC_Os03g56280 peroxisomal NAD-dependent malate dehydrogenase 0.06 OrthoFinder output from all 47 species
LOC_Os07g43700.2 MDH, LOC_Os07g43700 malate dehydrogenase component of AAA-ATPase motor complex 0.07 OrthoFinder output from all 47 species
Lfl_g01023 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.05 OrthoFinder output from all 47 species
MA_87937g0010 PMDH1 peroxisomal NAD-dependent malate dehydrogenase 0.07 OrthoFinder output from all 47 species
Mp2g08440.1 PMDH1 peroxisomal NAD-dependent malate dehydrogenase 0.1 OrthoFinder output from all 47 species
Msp_g06714 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.09 OrthoFinder output from all 47 species
Nbi_g02729 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.12 OrthoFinder output from all 47 species
Ore_g20188 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.06 OrthoFinder output from all 47 species
Pnu_g00639 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.03 OrthoFinder output from all 47 species
Ppi_g02813 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.11 OrthoFinder output from all 47 species
Ppi_g28680 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.02 OrthoFinder output from all 47 species
Ppi_g61921 MDH malate dehydrogenase component of AAA-ATPase motor... 0.07 OrthoFinder output from all 47 species
Sam_g16454 No alias peroxisomal NAD-dependent malate dehydrogenase &... 0.06 OrthoFinder output from all 47 species
Smo270780 PMDH1 Lipid metabolism.lipid degradation.fatty acid... 0.02 OrthoFinder output from all 47 species
Solyc01g106480.4.1 PMDH1, Solyc01g106480 peroxisomal NAD-dependent malate dehydrogenase 0.08 OrthoFinder output from all 47 species
Solyc03g115990.3.1 MDH, Solyc03g115990 malate dehydrogenase component of AAA-ATPase motor complex 0.03 OrthoFinder output from all 47 species
Solyc07g062650.4.1 mMDH1, Solyc07g062650 mitochondrial NAD-dependent malate dehydrogenase 0.03 OrthoFinder output from all 47 species
Spa_g10807 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.08 OrthoFinder output from all 47 species
Tin_g01665 PMDH1 peroxisomal NAD-dependent malate dehydrogenase &... 0.07 OrthoFinder output from all 47 species
Zm00001e005838_P001 PMDH1, Zm00001e005838 peroxisomal NAD-dependent malate dehydrogenase 0.08 OrthoFinder output from all 47 species
Zm00001e035622_P001 MDH, Zm00001e035622 Malate dehydrogenase, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022383 Lactate/malate_DH_C 190 353
IPR001236 Lactate/malate_DH_N 46 188
No external refs found!