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  5. Pir_g11763

Pir_g11763 (FTSH1)


Aliases : FTSH1

Description : component *(FtsH1/2/5/6/8) of FtsH plastidial protease complexes & original description: none


Gene families : OG0005126 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005126_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11763
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00232760 FTSH5, VAR1,... Protein degradation.peptidase families.metallopeptidase... 0.06 OrthoFinder output from all 47 species
AT1G50250 FTSH1 FTSH protease 1 0.09 OrthoFinder output from all 47 species
AT5G42270 FTSH5, VAR1 FtsH extracellular protease family 0.06 OrthoFinder output from all 47 species
Adi_g010069 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.12 OrthoFinder output from all 47 species
Aev_g18234 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Ala_g14669 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Als_g08677 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Als_g51773 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Aob_g06009 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.06 OrthoFinder output from all 47 species
Aob_g26986 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Aop_g03836 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.12 OrthoFinder output from all 47 species
Aspi01Gene30258.t1 FTSH1, Aspi01Gene30258 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Azfi_s3805.g117002 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Cba_g71747 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Ceric.14G083900.1 FTSH1, Ceric.14G083900 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.12 OrthoFinder output from all 47 species
Cre12.g485800 FTSH1 Protein degradation.peptidase families.metallopeptidase... 0.05 OrthoFinder output from all 47 species
Dac_g08252 FTSH5, VAR1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Dcu_g12715 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.12 OrthoFinder output from all 47 species
Dde_g00875 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.12 OrthoFinder output from all 47 species
Ehy_g09917 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.04 OrthoFinder output from all 47 species
Gb_06887 FTSH1 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 OrthoFinder output from all 47 species
LOC_Os06g51029.1 FTSH1, LOC_Os06g51029 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.04 OrthoFinder output from all 47 species
Len_g16157 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.14 OrthoFinder output from all 47 species
Lfl_g21843 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Mp3g08790.1 FTSH1 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 OrthoFinder output from all 47 species
Msp_g09054 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.12 OrthoFinder output from all 47 species
Nbi_g12160 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.12 OrthoFinder output from all 47 species
Ore_g05794 FTSH1 protease *(FtsH1/5) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36173 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Pnu_g06088 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Ppi_g16389 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.13 OrthoFinder output from all 47 species
Sacu_v1.1_s0154.g023581 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.03 OrthoFinder output from all 47 species
Sam_g09587 No alias component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.08 OrthoFinder output from all 47 species
Smo139726 FTSH1 Protein degradation.peptidase families.metallopeptidase... 0.03 OrthoFinder output from all 47 species
Solyc04g082250.3.1 FTSH5, VAR1,... component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.13 OrthoFinder output from all 47 species
Spa_g06354 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Tin_g09560 FTSH1 component *(FtsH1/2/5/6/8) of FtsH plastidial protease... 0.07 OrthoFinder output from all 47 species
Zm00001e030153_P001 FTSH1, Zm00001e030153 component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000642 Peptidase_M41 494 687
IPR041569 AAA_lid_3 435 476
IPR003959 ATPase_AAA_core 281 412
No external refs found!