1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g10873

Pir_g10873


Description : substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0002829 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002829_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g10873

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00169p00037240 evm_27.TU.AmTr_v1... Ankyrin repeat protein SKIP35 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g065050 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Adi_g078775 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aev_g10846 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g03239 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aop_g04841 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aop_g18704 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dac_g16079 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008519 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g18817 No alias substrate adaptor *(SKIP35) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!