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  5. Pir_g10473

Pir_g10473 (DCAF1)


Aliases : DCAF1

Description : substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin ligase complex & original description: none


Gene families : OG0003029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003029_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g10473

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00130610 DCAF1,... DDB1- and CUL4-associated factor homolog 1... 0.02 OrthoFinder output from all 47 species
Ala_g12806 DCAF1 substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Als_g18069 DCAF1 substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Als_g30310 DCAF1 substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Aob_g13741 DCAF1 substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Aop_g27054 DCAF1 substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Ceric.04G079100.1 DCAF1, Ceric.04G079100 substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Cre17.g725450 DCAF1 DDB1- and CUL4-associated factor homolog 1... 0.02 OrthoFinder output from all 47 species
Dac_g39976 DCAF1 substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Dcu_g08329 DCAF1 substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Ehy_g21800 DCAF1 substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01035587001 DCAF1 DDB1- and CUL4-associated factor homolog 1... 0.02 OrthoFinder output from all 47 species
LOC_Os04g59460.1 DCAF1, LOC_Os04g59460 DDB1- and CUL4-associated factor homolog 1... 0.03 OrthoFinder output from all 47 species
Len_g10330 DCAF1 substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Lfl_g05760 DCAF1 substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... 0.06 OrthoFinder output from all 47 species
MA_10435370g0020 DCAF1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g36728 DCAF1 substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Pp3c5_12860V3.1 Pp3c5_12860 No annotation 0.01 OrthoFinder output from all 47 species
Spa_g41401 DCAF1 substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Tin_g07661 DCAF1 substrate adaptor *(DCAF1) of CUL4-DDB1 E3 ubiquiTin... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!