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  5. Pir_g09918

Pir_g09918 (PSBR)


Aliases : PSBR

Description : component *(PsbR) of PS-II complex & original description: none


Gene families : OG0002211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g09918

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00162140 PSBR,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.03 OrthoFinder output from all 47 species
Adi_g011483 PSBR component *(PsbR) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g13057 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05205 PSBR component *(PsbR) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27127 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29630 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene37382.t1 PSBR, Aspi01Gene37382 component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02302 PSBR component *(PsbR) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g30771 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G086200.1 PSBR, Ceric.20G086200 component *(PsbR) of PS-II complex & original... 0.09 OrthoFinder output from all 47 species
Cre06.g261000 PSBR Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.02 OrthoFinder output from all 47 species
Dac_g12213 PSBR component *(PsbR) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g32722 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g25420 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g28297 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00341 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Gb_04149 PSBR component PsbR of PS-II complex 0.06 OrthoFinder output from all 47 species
LOC_Os08g10020.1 PSBR, LOC_Os08g10020 component PsbR of PS-II complex 0.05 OrthoFinder output from all 47 species
Len_g00088 PSBR component *(PsbR) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g19724 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38512 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
MA_282g0010 PSBR component PsbR of PS-II complex 0.04 OrthoFinder output from all 47 species
Mp3g05840.1 PSBR component PsbR of PS-II complex 0.09 OrthoFinder output from all 47 species
Msp_g02196 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g40620 PSBR component *(PsbR) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g06143 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c16_5650V3.1 PSBR, Pp3c16_5650 photosystem II subunit R 0.02 OrthoFinder output from all 47 species
Pp3c27_2340V3.1 PSBR, Pp3c27_2340 photosystem II subunit R 0.02 OrthoFinder output from all 47 species
Ppi_g01588 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024344 PSBR component *(PsbR) of PS-II complex & original... 0.04 OrthoFinder output from all 47 species
Sam_g12723 No alias component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g066310.3.1 PSBR, Solyc07g066310 component PsbR of PS-II complex 0.03 OrthoFinder output from all 47 species
Spa_g03368 PSBR component *(PsbR) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g07988 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e021601_P001 PSBR, Zm00001e021601 component PsbR of PS-II complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0042651 thylakoid membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR006814 PSII_PsbR 51 148
No external refs found!