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  5. Pir_g09257

Pir_g09257 (PSB27)


Aliases : PSB27

Description : protein involved in PS-II assembly *(Psb27) & original description: none


Gene families : OG0006913 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g09257
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT1G03600 PSB27 photosystem II family protein 0.08 OrthoFinder output from all 47 species
Adi_g017378 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.05 OrthoFinder output from all 47 species
Adi_g017379 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.05 OrthoFinder output from all 47 species
Ala_g03684 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Aob_g03856 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Aop_g01610 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.07 OrthoFinder output from all 47 species
Aspi01Gene05705.t1 PSB27, Aspi01Gene05705 protein involved in PS-II assembly *(Psb27) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0531.g075849 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.05 OrthoFinder output from all 47 species
Ceric.35G049900.1 PSB27, Ceric.35G049900 protein involved in PS-II assembly *(Psb27) & original... 0.14 OrthoFinder output from all 47 species
Cre05.g243800 PSB27 Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder output from all 47 species
Dac_g02601 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g44405 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.05 OrthoFinder output from all 47 species
Dde_g21620 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.11 OrthoFinder output from all 47 species
Ehy_g19278 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g20883 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01030552001 PSB27 Photosynthesis.photophosphorylation.photosystem... 0.08 OrthoFinder output from all 47 species
Gb_23437 PSB27 Psb27 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
LOC_Os03g21560.1 PSB27, LOC_Os03g21560 Psb27 protein involved in PS-II assembly 0.11 OrthoFinder output from all 47 species
Len_g11187 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.1 OrthoFinder output from all 47 species
MA_388691g0010 PSB27 Psb27 protein involved in PS-II assembly 0.09 OrthoFinder output from all 47 species
Mp3g19780.1 PSB27 Psb27 protein involved in PS-II assembly 0.14 OrthoFinder output from all 47 species
Msp_g04977 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.08 OrthoFinder output from all 47 species
Nbi_g03338 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.06 OrthoFinder output from all 47 species
Spa_g04006 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.06 OrthoFinder output from all 47 species
Spa_g04007 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.09 OrthoFinder output from all 47 species
Spa_g05331 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.06 OrthoFinder output from all 47 species
Spa_g05332 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.05 OrthoFinder output from all 47 species
Tin_g00234 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.06 OrthoFinder output from all 47 species
Zm00001e001572_P001 PSB27, Zm00001e001572 Psb27 protein involved in PS-II assembly 0.07 OrthoFinder output from all 47 species
Zm00001e038249_P001 PSB27, Zm00001e038249 Psb27 protein involved in PS-II assembly 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0010206 photosystem II repair IEA Interproscan
BP GO:0010207 photosystem II assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR025585 PSII_Pbs27 82 188
No external refs found!