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  5. Pir_g09214

Pir_g09214


Description : protein involved in PS-II assembly *(RBD1) & original description: none


Gene families : OG0005565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g09214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00123650 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
AT1G54500 No alias Rubredoxin-like superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g001061 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Aev_g02854 No alias protein involved in PS-II assembly *(RBD1) & original... 0.06 OrthoFinder output from all 47 species
Ala_g25461 No alias protein involved in PS-II assembly *(RBD1) & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene26833.t1 Aspi01Gene26833 protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0017.g014438 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.13G098300.1 Ceric.13G098300 protein involved in PS-II assembly *(RBD1) & original... 0.08 OrthoFinder output from all 47 species
Dac_g14889 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g03089 No alias protein involved in PS-II assembly *(RBD1) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g11378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_24370 No alias RBD1 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
LOC_Os08g23410.1 LOC_Os08g23410 RBD1 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
MA_158671g0010 No alias RBD1 protein involved in PS-II assembly 0.07 OrthoFinder output from all 47 species
Msp_g09118 No alias protein involved in PS-II assembly *(RBD1) & original... 0.05 OrthoFinder output from all 47 species
Pnu_g21356 No alias protein involved in PS-II assembly *(RBD1) & original... 0.05 OrthoFinder output from all 47 species
Pp3c1_22450V3.1 Pp3c1_22450 Rubredoxin-like superfamily protein 0.03 OrthoFinder output from all 47 species
Sam_g07714 No alias protein involved in PS-II assembly *(RBD1) & original... 0.05 OrthoFinder output from all 47 species
Sam_g07715 No alias protein involved in PS-II assembly *(RBD1) & original... 0.02 OrthoFinder output from all 47 species
Spa_g09611 No alias protein involved in PS-II assembly *(RBD1) & original... 0.07 OrthoFinder output from all 47 species
Tin_g43435 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e006086_P001 Zm00001e006086 RBD1 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR024935 Rubredoxin_dom 90 136
No external refs found!