Pir_g07424 (RPS11)

Aliases : RPS11

Description : not classified & original description: none

Gene families : OG0004584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004584_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g07424
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
ATCG00750	RPS11	ribosomal protein S11	0.19	OrthoFinder output from all 47 species
Aev_g01915	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.24	OrthoFinder output from all 47 species
Aev_g37240	RPS11	component *(uS11c) of small plastid ribosomal-subunit...	0.28	OrthoFinder output from all 47 species
Ala_g07144	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.12	OrthoFinder output from all 47 species
Als_g62775	RPS11	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Aop_g18582	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.09	OrthoFinder output from all 47 species
Azfi_s0027.g023689	No alias	not classified & original description: CDS=1-321	0.06	OrthoFinder output from all 47 species
Cba_g15340	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.15	OrthoFinder output from all 47 species
Ceric.05G042000.1	RPS11, Ceric.05G042000	component *(uS11c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Ceric.05G049400.1	RPS11, Ceric.05G049400	component *(uS11c) of small plastid ribosomal-subunit...	0.2	OrthoFinder output from all 47 species
Ceric.1Z122600.1	RPS11, Ceric.1Z122600	not classified & original description: pacid=50617110...	0.08	OrthoFinder output from all 47 species
Ceric.1Z196300.1	RPS11, Ceric.1Z196300	not classified & original description: pacid=50586509...	0.08	OrthoFinder output from all 47 species
Ceric.1Z237100.1	RPS11, Ceric.1Z237100	not classified & original description: pacid=50569351...	0.08	OrthoFinder output from all 47 species
Cre06.g288400	RPS11	30S ribosomal protein S11, chloroplastic OS=Chlorella vulgaris	0.02	OrthoFinder output from all 47 species
Dcu_g39431	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Dde_g49431	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Gb_08606	NFD3	component mtRPS11 of small ribosomal subunit proteome	0.06	OrthoFinder output from all 47 species
LOC_Os04g16838.1	RPS11, LOC_Os04g16838	component psRPS11 of small ribosomal subunit proteome	0.2	OrthoFinder output from all 47 species
LOC_Os10g21332.1	RPS11, LOC_Os10g21332	component psRPS11 of small ribosomal subunit proteome	0.2	OrthoFinder output from all 47 species
Len_g39780	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Mp4g09870.1	No alias	Ribosomal protein S11, mitochondrial OS=Marchantia...	0.13	OrthoFinder output from all 47 species
Mpzg00730.1	No alias	component psRPS11 of small ribosomal subunit proteome	0.13	OrthoFinder output from all 47 species
Nbi_g20255	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.23	OrthoFinder output from all 47 species
Pp3c14_21450V3.1	Pp3c14_21450	ribosomal protein S11	0.01	OrthoFinder output from all 47 species
Smo137780	RPS11	Protein biosynthesis.organelle translation...	0.05	OrthoFinder output from all 47 species
Solyc00g500030.1.1	RPS11, Solyc00g500030	component psRPS11 of small ribosomal subunit proteome	0.13	OrthoFinder output from all 47 species
Solyc00g500075.1.1	RPS11, Solyc00g500075	component psRPS11 of small ribosomal subunit proteome	0.13	OrthoFinder output from all 47 species
Spa_g02162	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Tin_g21094	RPS11	component *(uS11m) of small mitoribosomal-subunit...	0.14	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	HCCA
MF	GO:0004129	cytochrome-c oxidase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001971	Ribosomal_S11	71	116

External Links

No external refs found!

Pir_g07424 (RPS11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation