1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g06615

Pir_g06615 (WRKY42, AtWRKY42)


Aliases : WRKY42, AtWRKY42

Description : WRKY-type transcription factor & original description: none


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g06615
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00090300 WRKY4,... RNA biosynthesis.transcriptional activation.WRKY... 0.05 OrthoFinder output from all 47 species
AMTR_s00065p00201230 ATWRKY40,... RNA biosynthesis.transcriptional activation.WRKY... 0.05 OrthoFinder output from all 47 species
AT1G66550 WRKY67, ATWRKY67 WRKY DNA-binding protein 67 0.03 OrthoFinder output from all 47 species
AT1G80590 WRKY66, ATWRKY66 WRKY DNA-binding protein 66 0.03 OrthoFinder output from all 47 species
AT1G80840 ATWRKY40, WRKY40 WRKY DNA-binding protein 40 0.03 OrthoFinder output from all 47 species
AT2G44745 No alias WRKY family transcription factor 0.02 OrthoFinder output from all 47 species
AT4G18170 WRKY28, ATWRKY28 WRKY DNA-binding protein 28 0.03 OrthoFinder output from all 47 species
AT4G31800 WRKY18, ATWRKY18 WRKY DNA-binding protein 18 0.03 OrthoFinder output from all 47 species
AT4G39410 ATWRKY13, WRKY13 WRKY DNA-binding protein 13 0.03 OrthoFinder output from all 47 species
AT5G49520 WRKY48, ATWRKY48 WRKY DNA-binding protein 48 0.02 OrthoFinder output from all 47 species
Adi_g039781 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g13852 WRKY43, ATWRKY43 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20989 WRKY4 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21962 WRKY23, ATWRKY23 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08492 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10428 WRKY49, ATWRKY49 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19223 ATWRKY30, WRKY30 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21159 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07786 ATWRKY58, WRKY58 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28735 WRKY28, ATWRKY28 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g32004 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g48769 No alias WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50608 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14799 WRKY43, ATWRKY43 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18896.t1 ATWRKY57,... WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene39448.t1 WRKY3, Aspi01Gene39448 WRKY-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene49407.t1 ATWRKY71,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63359.t1 ATWRKY71,... WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0028.g023994 WRKY75, ATWRKY75 not classified & original description: CDS=78-1070 0.03 OrthoFinder output from all 47 species
Ceric.01G101400.1 WRKY4, Ceric.01G101400 WRKY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.04G004900.1 ATWRKY71,... WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.09G081700.1 ATWRKY50,... WRKY-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.24G019100.1 Ceric.24G019100 WRKY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.27G017800.1 WRKY42,... WRKY-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.28G003100.1 WRKY31,... WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g10501 WRKY48, ATWRKY48 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15157 WRKY48, ATWRKY48 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51139 WRKY9, ATWRKY9 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46910 No alias WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03867 WRKY42, AtWRKY42 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08194 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09836 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10883 WRKY28, ATWRKY28 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12121 WRKY42, AtWRKY42 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13568 WRKY28, ATWRKY28 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15580 WRKY75, ATWRKY75 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21871 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26863 WRKY49, ATWRKY49 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021397001 WRKY28, ATWRKY28 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01027069001 WRKY53, ATWRKY53 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01035426001 ATWRKY50, WRKY50 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01035885001 ATWRKY40, WRKY40 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
Gb_00544 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_00546 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_00547 AtWRKY41, WRKY41 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Gb_01873 ATWRKY71, WRKY71 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os01g14440.1 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os01g40260.1 ATWRKY50,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os01g60600.1 WRKY54,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os01g61080.1 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.02 OrthoFinder output from all 47 species
LOC_Os02g08440.1 ATWRKY40,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os05g25770.1 WRKY55,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os05g27730.1 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.03 OrthoFinder output from all 47 species
LOC_Os05g40070.1 ATWRKY64,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os06g44010.1 WRKY18,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os07g02060.1 ATWRKY57,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os07g48260.1 WRKY54,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os09g16510.1 WRKY46,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Len_g07922 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11805 ATWRKY30, WRKY30 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33077 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g21583 WRKY31, ATWRKY31 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24750 AtWRKY41, WRKY41 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_103616g0010 WRKY6, ATWRKY6 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_10429098g0010 WRKY42, AtWRKY42 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10436051g0010 WRKY6, ATWRKY6 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_11072g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_134559g0010 WRKY31, ATWRKY31 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
MA_2535g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_310991g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_6177g0010 AtWRKY41, WRKY41 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_76002g0010 No alias transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
MA_9394894g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g08960.1 WRKY53, ATWRKY53 transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Mp1g24950.1 ATWRKY64, WRKY64 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Mp6g16800.1 WRKY48, ATWRKY48 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Mp7g06550.1 ATWRKY57, WRKY57 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Msp_g07746 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11048 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26331 WRKY3 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26422 WRKY4 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06139 WRKY53, ATWRKY53 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29699 WRKY53, ATWRKY53 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27458 WRKY33, ATWRKY33 transcription factor *(WRKY33) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006969 WRKY6, ATWRKY6 WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g05178 No alias WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21683 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22459 No alias WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26717 No alias WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g032950.3.1 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc02g088340.4.1 WRKY3, Solyc02g088340 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc03g116890.3.1 ATWRKY40,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc05g015850.4.1 WRKY75,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc07g056280.3.1 ATWRKY71,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc12g056750.3.1 ATWRKY51,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Spa_g10733 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15879 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16109 ATWRKY45, WRKY45 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22580 WRKY48, ATWRKY48 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22896 ABO3, WRKY63, ATWRKY63 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26807 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51917 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13422 No alias WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g20270 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20358 ATWRKY57, WRKY57 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g32456 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019446_P001 WRKY55,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e020229_P002 ATWRKY71,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e025096_P001 ATWRKY40,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e025443_P001 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e025937_P001 WRKY72,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e026571_P004 ATWRKY30,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e027140_P002 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.03 OrthoFinder output from all 47 species
Zm00001e028011_P002 ATWRKY71,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e030443_P001 ATWRKY40,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e031518_P004 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.02 OrthoFinder output from all 47 species
Zm00001e032260_P001 ATWRKY50,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e032444_P001 ATWRKY71,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003657 WRKY_dom 391 448
No external refs found!