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  5. Pir_g06542

Pir_g06542 (ATUBC7, UBC7)


Aliases : ATUBC7, UBC7

Description : E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1 E3 ubiquitin ligase complex & original description: none


Gene families : OG0001574 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001574_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g06542
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
Adi_g073644 ATUBC7, UBC7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g125557 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.03 OrthoFinder output from all 47 species
Aev_g32389 UBC13 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.03 OrthoFinder output from all 47 species
Aop_g03063 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.05 OrthoFinder output from all 47 species
Azfi_s3359.g115484 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.18 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g07186 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Dde_g03186 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.05 OrthoFinder output from all 47 species
Dde_g09311 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.05 OrthoFinder output from all 47 species
GSVIVT01034196001 UBC13 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os05g38550.1 ATUBC7, UBC7,... component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.02 OrthoFinder output from all 47 species
Lfl_g12175 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Mp4g07670.1 ATUBC7, UBC7 component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.02 OrthoFinder output from all 47 species
Msp_g44963 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.05 OrthoFinder output from all 47 species
Nbi_g16559 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.03 OrthoFinder output from all 47 species
Ore_g05965 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.02 OrthoFinder output from all 47 species
Ppi_g02618 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.03 OrthoFinder output from all 47 species
Spa_g02541 ATUBC7, UBC7 E2 ubiquitin-conjugating component *(Ubc7/13/14) of HRD1... 0.03 OrthoFinder output from all 47 species
Zm00001e031834_P002 ATUBC7, UBC7,... component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 52 201
No external refs found!